Starting the WED12 configuration (compiling NEMO and NEMO’s maketools)
Suggested reading:
Create WED12 configuration
First of all, choose a configuration name, e.g. WED12, AMU12, PERIANT025, etc, and save it, i.e.: export CONFIG='WED12'
Compile for a new configuration, e.g. the WED12 configuration (you can have several ones)
cd MY_NEMO/NEMOGCM/CONFIG
echo "$CONFIG OPA_SRC LIM_SRC_3" >> cfg.txt ## here for OPA+LIM3 (see cfg.txt for other options)
mkdir $CONFIGChoose fppkeys prior to compilation (see NEMO documentations or examples in existing configurations, e.g. MY_NEMO/NEMOGCM/CONFIG/AMM12/cpp_AMM12.fcm), and compile, e.g. :
cd /NEMOGCM/CONFIG
echo " bld::tool::fppkeys key_dynldf_c2d key_dynspg_flt key_iomput key_ldfslp key_tide key_lim3 key_mpp_mpi key_mpp_rep key_nosignedzero key_trabbl key_traldf_c2d key_vvl key_xios2 key_zdfddm key_zdftke key_zdftmx " > ${CONFIG}/cpp_${CONFIG}.fcm
time ./makenemo -n $CONFIG -m XC_ARCHER_INTEL -j 8 &> compile.log &
tail -f compile.log ## to follow the compilation
ls -al ${CONFIG}/BLD/bin/nemo.exe ## to check that everything went fineNB: if you recompile, it is recommended to remove these directories:
rm -rf ${CONFIG}/WORK ${CONFIG}/BLD;cd ..
NEMO maketools
Compile REBUILD_NEMO (used to recombine outputs at the end of the jobs):
cd TOOLS
./maketools -h ## use same architecture as for NEMO's compilation (e.g. XC_ARCHER_INTEL)
./maketools -m XC_ARCHER_INTEL -n REBUILD_NEMO
ls -al REBUILD_NEMO/BLD/bin/ ## to check that everything went fine
cd ..